There are two types of archiving.
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Archiving as featured by your email provider. Not all providers offer that, but if they do, Ctrl+Shift+A will move the message from it’s current folder to an archive on the server.
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Automatic Archiving in eM Client. This you can setup in Menu > Tools > Settings > Mail > Automatic Archiving. This is a time activated feature that will remove all messages over a specific age from the server and save them to a local folder.